Datasets

Datasets are contributed sets of files associated with imaging one sample type with the same experimental conditions. Learn More

319 of 319 Datasets

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Dataset Name
EMPIAR ID
Organism Name
Runs
Annotated Objects
key visualization for Plasma membranes isolated by unroofing - Grid 01
Plasma membranes isolated by unroofing - Grid 01
Dataset ID: DS-10426
  • Willy W. Sun,
  • Dennis J Michalak,
  • Kem A. Sochacki,
  • Jenny E. Hinshaw,
  • Justin W. Taraska

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Homo sapiens
38
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key visualization for Plasma membranes isolated by unroofing - Grid 02
Plasma membranes isolated by unroofing - Grid 02
Dataset ID: DS-10427
  • Willy W. Sun,
  • Dennis J Michalak,
  • Kem A. Sochacki,
  • Jenny E. Hinshaw,
  • Justin W. Taraska

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Homo sapiens
22
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key visualization for Plasma membranes isolated by unroofing - Grid 03
Plasma membranes isolated by unroofing - Grid 03
Dataset ID: DS-10428
  • Willy W. Sun,
  • Dennis J Michalak,
  • Kem A. Sochacki,
  • Jenny E. Hinshaw,
  • Justin W. Taraska

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Homo sapiens
24
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key visualization for Plasma membranes isolated by unroofing - Grid 04
Plasma membranes isolated by unroofing - Grid 04
Dataset ID: DS-10429
  • Willy W. Sun,
  • Dennis J Michalak,
  • Kem A. Sochacki,
  • Jenny E. Hinshaw,
  • Justin W. Taraska

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Homo sapiens
32
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key visualization for Plasma membranes isolated by unroofing - Grid 05
Plasma membranes isolated by unroofing - Grid 05
Dataset ID: DS-10430
  • Willy W. Sun,
  • Dennis J Michalak,
  • Kem A. Sochacki,
  • Jenny E. Hinshaw,
  • Justin W. Taraska

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Homo sapiens
111
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key visualization for Plasma membranes isolated by unroofing - Grid 06
Plasma membranes isolated by unroofing - Grid 06
Dataset ID: DS-10431
  • Willy W. Sun,
  • Dennis J Michalak,
  • Kem A. Sochacki,
  • Jenny E. Hinshaw,
  • Justin W. Taraska

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Homo sapiens
87
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key visualization for Plasma membranes isolated by unroofing - Grid 07
Plasma membranes isolated by unroofing - Grid 07
Dataset ID: DS-10432
  • Willy W. Sun,
  • Dennis J Michalak,
  • Kem A. Sochacki,
  • Jenny E. Hinshaw,
  • Justin W. Taraska

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Homo sapiens
71
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key visualization for Plasma membranes isolated by unroofing - Grid 08
Plasma membranes isolated by unroofing - Grid 08
Dataset ID: DS-10433
  • Willy W. Sun,
  • Dennis J Michalak,
  • Kem A. Sochacki,
  • Jenny E. Hinshaw,
  • Justin W. Taraska

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Homo sapiens
20
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key visualization for Plasma membranes isolated by unroofing - Grid 09
Plasma membranes isolated by unroofing - Grid 09
Dataset ID: DS-10434
  • Willy W. Sun,
  • Dennis J Michalak,
  • Kem A. Sochacki,
  • Jenny E. Hinshaw,
  • Justin W. Taraska

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Homo sapiens
68
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key visualization for Plasma membranes isolated by unroofing - Grid 10
Plasma membranes isolated by unroofing - Grid 10
Dataset ID: DS-10435
  • Willy W. Sun,
  • Dennis J Michalak,
  • Kem A. Sochacki,
  • Jenny E. Hinshaw,
  • Justin W. Taraska

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Homo sapiens
24
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key visualization for Affinity-Captured Endo-/Lysosomes
Affinity-Captured Endo-/Lysosomes
Dataset ID: DS-10444
  • Hannah Siems,
  • Yue Yu,
  • Ariana Peck,
  • Jonathan Schwartz,
  • Elizabeth Montabana,
  • Mohammadreza Paraan,
  • Daniel Serwas

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Homo Sapiens
181
  • membrane
key visualization for Synaptosomes from rat hippocampi (without centrifugation)
Synaptosomes from rat hippocampi (without centrifugation)
Dataset ID: DS-10443
  • Mallak Ali,
  • Julia Peukes,
  • Yue Yu,
  • Ariana Peck,
  • ... ,
  • Shu-Hsien Sheu,
  • Mohammadreza Paraan

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Sprague Dawley Rat
170
  • membrane
key visualization for CZII - CryoET Object Identification Challenge - Experimental Training Data
CZII - CryoET Object Identification Challenge - Experimental Training Data
Dataset ID: DS-10440
  • Ariana Peck,
  • Yue Yu,
  • Jonathan Schwartz,
  • ... ,
  • Kyle I. S. Harrington,
  • Mohammadreza Paraan

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7
  • Beta-amylase
  • Beta-galactosidase
  • cytosolic ribosome
  • 3 More Objects
key visualization for CZII - CryoET Object Identification Challenge - Simulated Training Data
CZII - CryoET Object Identification Challenge - Simulated Training Data
Dataset ID: DS-10441
  • Jonathan Schwartz,
  • Kyle I. S. Harrington,
  • Mohammadreza Paraan

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27
  • Beta-amylase
  • Beta-galactosidase
  • cytosolic ribosome
  • 4 More Objects
key visualization for CryoET of near-minimal cells Mycoplasma mycoides JCVI-Syn3A for the development of subtomogram averaging pipelines
CryoET of near-minimal cells Mycoplasma mycoides JCVI-Syn3A for the development of subtomogram averaging pipelines
Dataset ID: DS-10442
  • Mallak Ali,
  • Ariana Peck,
  • Yue Yu,
  • Jonathan Schwartz,
  • ... ,
  • Mohammadreza Paraan

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Mycoplasma mycoides subsp. capri str. GM12
262
  • cytosolic ribosome
  • membrane
key visualization for CZ Imaging Institute simulated dataset 1
CZ Imaging Institute simulated dataset 1
Dataset ID: DS-10439
  • Jonathan Schwartz,
  • Bridget Carragher

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27
  • Alkaline phosphatase, placental type
  • cytosolic ribosome
  • GroEL-GroES complex
  • 4 More Objects
key visualization for Cryo-ET dataset (3) of dormant microporidian spores from Encephalitozoon intestinalis
Cryo-ET dataset (3) of dormant microporidian spores from Encephalitozoon intestinalis
Dataset ID: DS-10437
  • Mahrukh Usmani,
  • Nicolas Coudray,
  • ... ,
  • Damian C. Ekiert,
  • Gira Bhabha

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Encephalitozoon intestinalis
94
  • cellular anatomical entity
  • microsporidian-type endospore
  • microsporidian-type exospore
  • 7 More Objects
key visualization for Cryo-ET dataset of dormant microporidian spores from Encephalitozoon hellem
Cryo-ET dataset of dormant microporidian spores from Encephalitozoon hellem
Dataset ID: DS-10438
  • Kotaro Kelley,
  • Gira Bhabha,
  • Alex J. Noble,
  • Clinton S. Potter,
  • Bridget Carragher

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Encephalitozoon hellem
12
  • microsporidian-type endospore
  • microsporidian-type exospore
  • plasma membrane
  • 3 More Objects
key visualization for Cryo-ET datasets (1 and 2) of dormant microporidian spores from Encephalitozoon intestinalis
Cryo-ET datasets (1 and 2) of dormant microporidian spores from Encephalitozoon intestinalis
Dataset ID: DS-10436
  • Mahrukh Usmani,
  • Nicolas Coudray,
  • ... ,
  • Damian C. Ekiert,
  • Gira Bhabha

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Encephalitozoon intestinalis
91
  • microsporidian-type endospore
  • microsporidian-type exospore
  • nuclear envelope
  • 5 More Objects
key visualization for In situ cryo-ET dataset of Chlamydomonas reinhardtii prepared using cryo-plasmaFIB milling - Full Dataset
In situ cryo-ET dataset of Chlamydomonas reinhardtii prepared using cryo-plasmaFIB milling - Full Dataset
Dataset ID: DS-10302
  • Ron Kelley,
  • Sagar Khavnekar,
  • ... ,
  • Abhay Kotecha
EMPIAR-11830
Chlamydomonas reinhardtii
1,811
  • cell wall
  • chaperonin-containing T-complex
  • chloroplast outer membrane
  • 20 More Objects
  • 1
  • 2
  • 3
  • 4
  • 5
  • 16