Datasets

Datasets contain data such as annotations, tomograms, frames, tilt series, and metadata such as CTF and alignment from a single set of experimental conditions Learn More

370 of 370 Datasets

Dataset Name
EMPIAR ID
Organism Name
Runs
Objects
key visualization for Cryo-electron tomography of a planar cryo-FIB lift-out from adult mouse hippocampus CA1 spanning stratum pyramidale through stratum lacunosum-moleculare
EMPIAR-13314
Mus musculus
223
--
key visualization for Cryo-electron tomography of purified E. coli 70S ribosomes acquired by fast-incremental single-exposure (FISE) tilt series
EMPIAR-10304
Escherichia coli
12
--
key visualization for PACE-tomo of purified Escherichia coli 70S ribosomes
Dataset ID: DS-10498
  • Fabian Eisenstein,
  • ... ,
  • Radostin Danev
EMPIAR-10985
Escherichia coli
81
--
key visualization for CryoETSim chromatin subset - simulated cryo-electron tomograms of nucleosome arrays and DNA filaments
Dataset ID: DS-10491
  • Frosina Stojanovska,
  • ... ,
  • Julia Mahamid,
  • Anna Kreshuk,
  • Judith B. Zaugg
EMPIAR-10499
not_reported
50
  • double-stranded DNA polynucleotide
    GT
  • nucleosome
    GT
key visualization for CryoETSim general subset - simulated cryo-electron tomograms of cellular molecular crowding
Dataset ID: DS-10490
  • Frosina Stojanovska,
  • ... ,
  • Julia Mahamid,
  • Anna Kreshuk,
  • Judith B. Zaugg
EMPIAR-10499
not_reported
300
  • 2-Enoyl thioester reductase Etr1p/Etr2p
    GT
  • 20S proteasome
    GT
  • 26S proteasome
    GT
  • Total 142 Objects
key visualization for CryoETSim minimal-bacterium subset - simulated cryo-electron tomograms of bacterial transcription/translation
Dataset ID: DS-10492
  • Frosina Stojanovska,
  • ... ,
  • Julia Mahamid,
  • Anna Kreshuk,
  • Judith B. Zaugg
EMPIAR-10499
not_reported
50
  • 5-HT3 receptor
    GT
  • 70S ribosome
    GT
  • Actin
    GT
  • Total 24 Objects
key visualization for Cryo-ET of cryo-FIB-milled Rickettsia parkeri wild-type bacteria (2.4 A, UW-Madison K3)
Dataset ID: DS-10509
  • Meghan C. Bacher,
  • ... ,
  • Matthew D. Welch

--

Rickettsia parkeri
22
--
key visualization for Cryo-ET of purified Rickettsia parkeri ompBSTOP::tn bacteria (1.9 A, UW-Madison K3)
Dataset ID: DS-10508
  • Meghan C. Bacher,
  • ... ,
  • Matthew D. Welch

--

Rickettsia parkeri
48
--
key visualization for Cryo-ET of purified Rickettsia parkeri wild-type bacteria (3 A, UW-Madison K3)
Dataset ID: DS-10507
  • Meghan C. Bacher,
  • ... ,
  • Matthew D. Welch

--

Rickettsia parkeri
34
--
key visualization for Cryo-ET of Rickettsia parkeri wild-type in infected A549 cells (3.7 A, UW-Madison K3)
Dataset ID: DS-10505
  • Meghan C. Bacher,
  • ... ,
  • Matthew D. Welch

--

Rickettsia parkeri
67
--
key visualization for Cryo-ET tomograms of Rickettsia parkeri ompBSTOP::tn in infected A549 cells (UC Berkeley K2)

--

Rickettsia parkeri
16
--
key visualization for Crossed laser phase plate (xLPP) demonstration tomogram of single-layer apoferritin
Dataset ID: DS-10496
  • Joshua Hutchings,
  • ... ,
  • Yue Yu,
  • Pavel K. Olshin

--

Mus musculus
1
--
key visualization for PP7 virus-like particles in E. coli at 3.0 Å (plunge-frozen)
Dataset ID: DS-10493
  • Mallak Ali,
  • ... ,
  • Mohammadreza Paraan

--

Escherichia coli BL21(DE3)
402
  • Capsid protein
  • Chaperonin GroEL
    GT
key visualization for PP7 virus-like particles in E. coli at 3.9 Å (lamellae)
Dataset ID: DS-10494
  • Mallak Ali,
  • ... ,
  • Mohammadreza Paraan

--

Escherichia coli BL21(DE3)
131
  • Capsid protein
    GT
key visualization for Vibrio cholerae competence pilus - ComEA deletion strain
Dataset ID: DS-10485
  • Stefano Maggi,
  • ...

--

Vibrio cholerae
168
  • bacterial-type flagellum motor
    GT
key visualization for Vibrio cholerae competence pilus - PilQ GFP variant, PilT deletion

--

Vibrio cholerae
153
  • bacterial-type flagellum motor
    GT
key visualization for Vibrio cholerae competence pilus - PilT and PilU inactive variants

--

Vibrio cholerae
113
  • bacterial-type flagellum motor
    GT
key visualization for Vibrio cholerae competence pilus - PilT deletion strain
Dataset ID: DS-10488
  • Stefano Maggi,
  • ...

--

Vibrio cholerae
250
  • bacterial-type flagellum motor
    GT
key visualization for Vibrio cholerae competence pilus - PilT K136A inactive variant

--

Vibrio cholerae
159
  • bacterial-type flagellum motor
    GT
key visualization for Arabidopsis thaliana pollen tubes
Dataset ID: DS-10479
  • William Jules Nicolas,
  • Grant Jensen,
  • Elliot M Meyerowitz

--

Arabidopsis thaliana
47
  • cytoplasmic vesicle
  • cytoskeleton
  • endoplasmic reticulum
  • Total 8 Objects
  • 1
  • 2
  • 3
  • 4
  • 5
  • 19