Datasets

Datasets are contributed sets of files associated with imaging one sample type with the same experimental conditions. Learn More

319 of 319 Datasets

Dataset Name
EMPIAR ID
Organism Name
Runs
Annotated Objects
key visualization for Plasma membranes isolated by unroofing - Grid 01
Dataset ID: DS-10426

Willy W. Sun, Dennis J Michalak, Kem A. Sochacki, Jenny E. Hinshaw, Justin W. Taraska

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Homo sapiens
38
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key visualization for Plasma membranes isolated by unroofing - Grid 02
Dataset ID: DS-10427

Willy W. Sun, Dennis J Michalak, Kem A. Sochacki, Jenny E. Hinshaw, Justin W. Taraska

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Homo sapiens
22
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key visualization for Plasma membranes isolated by unroofing - Grid 03
Dataset ID: DS-10428

Willy W. Sun, Dennis J Michalak, Kem A. Sochacki, Jenny E. Hinshaw, Justin W. Taraska

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Homo sapiens
24
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key visualization for Plasma membranes isolated by unroofing - Grid 04
Dataset ID: DS-10429

Willy W. Sun, Dennis J Michalak, Kem A. Sochacki, Jenny E. Hinshaw, Justin W. Taraska

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Homo sapiens
32
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key visualization for Plasma membranes isolated by unroofing - Grid 05
Dataset ID: DS-10430

Willy W. Sun, Dennis J Michalak, Kem A. Sochacki, Jenny E. Hinshaw, Justin W. Taraska

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Homo sapiens
111
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key visualization for Plasma membranes isolated by unroofing - Grid 06
Dataset ID: DS-10431

Willy W. Sun, Dennis J Michalak, Kem A. Sochacki, Jenny E. Hinshaw, Justin W. Taraska

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Homo sapiens
87
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key visualization for Plasma membranes isolated by unroofing - Grid 07
Dataset ID: DS-10432

Willy W. Sun, Dennis J Michalak, Kem A. Sochacki, Jenny E. Hinshaw, Justin W. Taraska

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Homo sapiens
71
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key visualization for Plasma membranes isolated by unroofing - Grid 08
Dataset ID: DS-10433

Willy W. Sun, Dennis J Michalak, Kem A. Sochacki, Jenny E. Hinshaw, Justin W. Taraska

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Homo sapiens
20
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key visualization for Plasma membranes isolated by unroofing - Grid 09
Dataset ID: DS-10434

Willy W. Sun, Dennis J Michalak, Kem A. Sochacki, Jenny E. Hinshaw, Justin W. Taraska

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Homo sapiens
68
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key visualization for Plasma membranes isolated by unroofing - Grid 10
Dataset ID: DS-10435

Willy W. Sun, Dennis J Michalak, Kem A. Sochacki, Jenny E. Hinshaw, Justin W. Taraska

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Homo sapiens
24
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key visualization for Affinity-Captured Endo-/Lysosomes
Dataset ID: DS-10444

Hannah Siems, Yue Yu, Ariana Peck, Jonathan Schwartz, Elizabeth Montabana, Mohammadreza Paraan, Daniel Serwas

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Homo Sapiens
181
  • membrane
key visualization for Synaptosomes from rat hippocampi (without centrifugation)
Dataset ID: DS-10443

Mallak Ali, Julia Peukes, Yue Yu, Ariana Peck, ... , Shu-Hsien Sheu, Mohammadreza Paraan

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Sprague Dawley Rat
170
  • membrane
key visualization for CZII - CryoET Object Identification Challenge - Experimental Training Data
Dataset ID: DS-10440

Ariana Peck, Yue Yu, Jonathan Schwartz, ... , Kyle I. S. Harrington, Mohammadreza Paraan

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7
  • Beta-amylase
  • Beta-galactosidase
  • cytosolic ribosome
  • 3 More Objects
key visualization for CZII - CryoET Object Identification Challenge - Simulated Training Data
Dataset ID: DS-10441

Jonathan Schwartz, Kyle I. S. Harrington, Mohammadreza Paraan

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27
  • Beta-amylase
  • Beta-galactosidase
  • cytosolic ribosome
  • 4 More Objects
key visualization for CryoET of near-minimal cells Mycoplasma mycoides JCVI-Syn3A for the development of subtomogram averaging pipelines
Dataset ID: DS-10442

Mallak Ali, Ariana Peck, Yue Yu, Jonathan Schwartz, ... , Mohammadreza Paraan

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Mycoplasma mycoides subsp. capri str. GM12
262
  • cytosolic ribosome
  • membrane
key visualization for CZ Imaging Institute simulated dataset 1
Dataset ID: DS-10439

Jonathan Schwartz, Bridget Carragher

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27
  • Alkaline phosphatase, placental type
  • cytosolic ribosome
  • GroEL-GroES complex
  • 4 More Objects
key visualization for Cryo-ET dataset (3) of dormant microporidian spores from Encephalitozoon intestinalis
Dataset ID: DS-10437

Mahrukh Usmani, Nicolas Coudray, ... , Damian C. Ekiert, Gira Bhabha

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Encephalitozoon intestinalis
94
  • cellular anatomical entity
  • microsporidian-type endospore
  • microsporidian-type exospore
  • 7 More Objects
key visualization for Cryo-ET dataset of dormant microporidian spores from Encephalitozoon hellem
Dataset ID: DS-10438

Kotaro Kelley, Gira Bhabha, Alex J. Noble, Clinton S. Potter, Bridget Carragher

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Encephalitozoon hellem
12
  • microsporidian-type endospore
  • microsporidian-type exospore
  • plasma membrane
  • 3 More Objects
key visualization for Cryo-ET datasets (1 and 2) of dormant microporidian spores from Encephalitozoon intestinalis
Dataset ID: DS-10436

Mahrukh Usmani, Nicolas Coudray, ... , Damian C. Ekiert, Gira Bhabha

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Encephalitozoon intestinalis
91
  • microsporidian-type endospore
  • microsporidian-type exospore
  • nuclear envelope
  • 5 More Objects
key visualization for In situ cryo-ET dataset of Chlamydomonas reinhardtii prepared using cryo-plasmaFIB milling - Full Dataset
EMPIAR-11830
Chlamydomonas reinhardtii
1,811
  • cell wall
  • chaperonin-containing T-complex
  • chloroplast outer membrane
  • 20 More Objects
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