Depositions

Depositions are collections of annotations, or imaging datasets containing annotations created using one or more methods contributed at once. Learn More

37 of 37 Depositions

Deposition Name
Deposition Date
Annotations
Annotated Objects
Object Shape Type
key visualization for CZII CryoET Object Identification Challenge - 10th place solution - Josef Slavicek
2025-02-25

2,875

Across 2 Datasets

  • Beta-amylase
  • Beta-galactosidase
  • cytosolic ribosome
  • 3 More Objects
  • Point
key visualization for CZII CryoET Object Identification Challenge - 9th place solution - Avengers
2025-02-25

2,385

Across 2 Datasets

  • Beta-galactosidase
  • cytosolic ribosome
  • ferritin complex
  • 2 More Objects
  • Point
key visualization for CZII CryoET Object Identification Challenge - 8th place solution - I Cryo Everyteim

CZII CryoET Object Identification Challenge - 8th place solution - I Cryo Everyteim

Deposition ID: CZCDP-10326

  • Sergio Alvarez da Silva Junior,
  • Naoki Hashimoto,
  • Sirapoab Chaikunsaeng,
  • Sahil Barnwal

2025-02-25

2,401

Across 2 Datasets

  • Beta-galactosidase
  • cytosolic ribosome
  • ferritin complex
  • 2 More Objects
  • Point
key visualization for CZII CryoET Object Identification Challenge - 7th place solution - kobakos
2025-02-25

2,395

Across 2 Datasets

  • Beta-galactosidase
  • cytosolic ribosome
  • ferritin complex
  • 2 More Objects
  • Point
key visualization for CZII CryoET Object Identification Challenge - 6th place solution - tomoon33
2025-02-25

2,390

Across 2 Datasets

  • Beta-galactosidase
  • cytosolic ribosome
  • ferritin complex
  • 2 More Objects
  • Point
key visualization for CZII CryoET Object Identification Challenge - 5th place solution - Youssef Ouertani
2025-02-25

2,371

Across 2 Datasets

  • Beta-galactosidase
  • cytosolic ribosome
  • ferritin complex
  • 2 More Objects
  • Point
key visualization for CZII CryoET Object Identification Challenge - 4th place solution - yu4u & tattaka
2025-02-25

2,394

Across 2 Datasets

  • Beta-galactosidase
  • cytosolic ribosome
  • ferritin complex
  • 2 More Objects
  • Point
key visualization for CZII CryoET Object Identification Challenge - 3rd place solution - ONCE UPON A MOON
2025-02-25

2,380

Across 2 Datasets

  • Beta-galactosidase
  • cytosolic ribosome
  • ferritin complex
  • 2 More Objects
  • Point
key visualization for CZII CryoET Object Identification Challenge - 2nd place solution - LuoZiqian&Lion
2025-02-25

2,412

Across 2 Datasets

  • Beta-galactosidase
  • cytosolic ribosome
  • ferritin complex
  • 2 More Objects
  • Point
key visualization for CZII CryoET Object Identification Challenge - 1st place solution - Daddies

CZII CryoET Object Identification Challenge - 1st place solution - Daddies

Deposition ID: CZCDP-10319

  • Christof Henkel,
  • Eugene Khvedchenya

2025-02-25

2,716

Across 2 Datasets

  • Beta-amylase
  • Beta-galactosidase
  • cytosolic ribosome
  • 3 More Objects
  • Point
key visualization for Automated Synaptic Vesicle Segmentation in Synaptosomes

Automated Synaptic Vesicle Segmentation in Synaptosomes

Deposition ID: CZCDP-10330

  • Sarah Muth,
  • Constantin Pape

2025-02-19

70

Across 1 Dataset

  • synaptic vesicle
  • Instance Segmentation
  • Segmentation Mask
key visualization for Comprehensive semi-supervised automated annotations of macromolecules and organelles in C. reinhardtii tomograms
2025-01-01

35,738

Across 2 Datasets

  • cell wall
  • chaperonin-containing T-complex
  • chloroplast outer membrane
  • 20 More Objects
  • Segmentation Mask
key visualization for Affinity-Captured Endo-/Lysosomes

Affinity-Captured Endo-/Lysosomes

Deposition ID: CZCDP-10318

  • Hannah Siems,
  • Yue Yu,
  • Ariana Peck,
  • Jonathan Schwartz,
  • Elizabeth Montabana,
  • Mohammadreza Paraan,
  • Daniel Serwas

2024-12-06

181

Across 1 Dataset

  • membrane
  • Segmentation Mask
key visualization for Manual annotations of type IV protein secretion system complexes
2024-12-03

31

Across 4 Datasets

  • type IV secretion system complex
  • Oriented Point
key visualization for Manual annotations of type II protein secretion system complexes
2024-12-03

6

Across 1 Dataset

  • type II protein secretion system complex
  • Oriented Point
key visualization for Manual annotations of complete bacterial-type flagellum basal bodies
2024-12-03

40

Across 7 Datasets

  • bacterial-type flagellum basal body
  • Oriented Point
key visualization for Cryo-ET of isolated segments of synaptic terminals, synaptosomes, from rat hippocampi

Cryo-ET of isolated segments of synaptic terminals, synaptosomes, from rat hippocampi

Deposition ID: CZCDP-10313

  • Mallak Ali,
  • Julia Peukes,
  • Yue Yu,
  • Ariana Peck,
  • ... ,
  • Shu-Hsien Sheu,
  • Mohammadreza Paraan

2024-11-26

484

Across 6 Datasets

  • membrane
  • Segmentation Mask
key visualization for CZII - CryoET Object Identification Challenge

CZII - CryoET Object Identification Challenge

Deposition ID: CZCDP-10310

  • Ariana Peck,
  • Yue Yu,
  • Jonathan Schwartz,
  • ... ,
  • Kyle I. S. Harrington,
  • Mohammadreza Paraan

2024-10-30

3,462

Across 4 Datasets

  • Beta-amylase
  • Beta-galactosidase
  • cytosolic ribosome
  • 4 More Objects
  • Oriented Point
  • Point
  • Segmentation Mask
key visualization for CryoET of near-minimal cells Mycoplasma mycoides JCVI-Syn3A for the development of subtomogram averaging pipelines

CryoET of near-minimal cells Mycoplasma mycoides JCVI-Syn3A for the development of subtomogram averaging pipelines

Deposition ID: CZCDP-10312

  • Mallak Ali,
  • Ariana Peck,
  • Yue Yu,
  • Jonathan Schwartz,
  • ... ,
  • Mohammadreza Paraan

2024-10-15

523

Across 1 Dataset

  • cytosolic ribosome
  • membrane
  • Point
  • Segmentation Mask
key visualization for CZ Imaging Institute simulated data

CZ Imaging Institute simulated data

Deposition ID: CZCDP-10309

  • Jonathan Schwartz,
  • Bridget Carragher

2024-08-21

189

Across 1 Dataset

  • Alkaline phosphatase, placental type
  • cytosolic ribosome
  • GroEL-GroES complex
  • 4 More Objects
  • Oriented Point
  • Segmentation Mask
  • 1
  • 2