All Depositions

Deposition

CZII - CryoET Object Identification Challenge

  • Deposition ID:CZCDP-10310

Release Date: 2024-10-30

Last Modified: 2024-02-25

key visualization for CZII - CryoET Object Identification Challenge

Photo Caption: Central slab of 4 representative tomograms with selected sets of annotations.

Deposition Overview

Experimental and simulated training data for the CryoET Object Identification Challenge. Each dataset contains tilt series, alignments, tomograms and ground truth annotations for six protein complexes (Apo-ferritin, Beta-amylase, Beta-galactosidase, cytosolic ribosomes, thyroglobulin and VLP). Curation procedures are described in detail in the accompanying paper. Details on how the dataset is used in the competition are available on the competition page.

Authors

Deposition Data

Annotations:3,462

Related Databases

Annotation Methods Summary

Method Type

Hybrid

Method Links

Method Type

Hybrid

Method Links

Method Type

Automated

Method Links

Datasets with Deposition Data

4 of 4 Datasets

Dataset Name
Organism
Runs

With deposition data

Annotations

Deposition only

Annotated Objects

Deposition only

key visualization for CZII - CryoET Object Identification Challenge - Experimental Training Data

Dataset ID: DS-10440

  • Ariana Peck,
  • Yue Yu,
  • Jonathan Schwartz,
  • ... ,
  • Kyle I. S. Harrington,
  • Mohammadreza Paraan
--
7
49
  • Beta-amylase
    GT
  • Beta-galactosidase
    GT
  • cytosolic ribosome
    GT
  • Total 7 Objects
key visualization for CZII - CryoET Object Identification Challenge - Public Test Dataset

Dataset ID: DS-10445

  • Ariana Peck,
  • Yue Yu,
  • Jonathan Schwartz,
  • ... ,
  • Kyle I. S. Harrington,
  • Mohammadreza Paraan
--
121
818
  • Beta-amylase
    GT
  • Beta-galactosidase
    GT
  • cytosolic ribosome
    GT
  • Total 7 Objects
key visualization for CZII - CryoET Object Identification Challenge - Private Test Dataset

Dataset ID: DS-10446

  • Ariana Peck,
  • Yue Yu,
  • Jonathan Schwartz,
  • ... ,
  • Kyle I. S. Harrington,
  • Mohammadreza Paraan
--
364
2,406
  • Beta-amylase
    GT
  • Beta-galactosidase
    GT
  • cytosolic ribosome
    GT
  • Total 7 Objects
key visualization for CZII - CryoET Object Identification Challenge - Simulated Training Data

Dataset ID: DS-10441

  • Jonathan Schwartz,
  • Kyle I. S. Harrington,
  • Mohammadreza Paraan
--
27
189
  • Beta-amylase
    GT
  • Beta-galactosidase
    GT
  • cytosolic ribosome
    GT
  • Total 7 Objects