All DatasetsDataset: Cryo-electron tomography of a cryo-FIB lift-out from adult mouse hippocampal CA1 stratum radiatum (dataset 1)

Run

Position008

  • Run ID:RN-36552

Release Date: 2026-09-04

Last Modified: 2026-09-04

key visualization for Position008

Photo Caption: Central slab of tomogram 63340 with selected set of annotations.

Run Overview

Tilt Series

Tilt Quality
3 - Moderate
Tilt Range119.99° (-74.07° to 45.92°)
Tilt Schemedose-symmetric

Tomogram

Samplings Available10.01Å
Tomogram Processing
  • denoised,
  • filtered,
  • raw

Objects

  • membrane,
  • sample
Browse Run Contents

Tomograms

5 of 5 Tomograms

Tomogram Name
Deposition Date
Alignment ID
Voxel Spacing
Reconstruction Method
Post Processing
Software
key visualization for Position008

63343 WBP Denoised

Tomogram ID: TM-63343
Author Submitted
  • Utz Heinrich Ermel
2026-03-12

AL-37844

10.01Å
(1248, 1248, 564)px
WBP
denoised
Reconstruction SoftwareAreTomo3 v2.3.1
Processing SoftwareIsoNet2
key visualization for Position008

63342 WBP Denoised

Tomogram ID: TM-63342
Author Submitted
  • Utz Heinrich Ermel
2026-03-12

AL-37844

10.01Å
(1248, 1248, 564)px
WBP
denoised
Reconstruction SoftwareAreTomo3 v2.3.1
Processing SoftwareDeepDeWedge
key visualization for Position008

63341 Fourier Space Filtered

Tomogram ID: TM-63341
Author Submitted
  • Utz Heinrich Ermel
2026-03-12

AL-37844

10.01Å
(1248, 1248, 564)px
Fourier_Space
filtered
Reconstruction SoftwareWarpTools
Processing SoftwareWarpTools
key visualization for Position008

63340 WBP Filtered

Tomogram ID: TM-63340
Author Submitted
  • Utz Heinrich Ermel
2026-03-12

AL-37844

10.01Å
(1248, 1248, 564)px
WBP
filtered
Reconstruction SoftwareAreTomo3 v2.3.1
Processing SoftwareAreTomo3 v2.3.1
key visualization for Position008

63339 WBP Raw

Tomogram ID: TM-63339
Author Submitted
  • Utz Heinrich Ermel
2026-03-12

AL-37844

10.01Å
(1248, 1248, 564)px
WBP
raw
Reconstruction SoftwareAreTomo3 v2.3.1
Processing SoftwareAreTomo3 v2.3.1