All Datasets Dataset: In situ cryo-ET dataset of Chlamydomonas reinhardtii prepared using cryo-plasmaFIB milling - Full Dataset

Run

01082023_BrnoKrios_Arctis_WebUI_Position_15

Run ID:RN-14118

Release Date: 2024-04-10

Last Modified: 2024-04-10

key visualization for 01082023_BrnoKrios_Arctis_WebUI_Position_15

Run Overview

Data Summary

Frames:Not Submitted
Tilt Series:Available
Alignment:Available
Tomograms:1
Annotations:17

Tilt Series

Tilt Quality	5 - Excellent
Tilt Range	84° (-39.02° to 44.98°)
Tilt Scheme	dose-symmetric

Tomogram

Samplings Available	7.84Å
Tomogram Processing	denoised
Annotated Objects	chaperonin-containing T-complex, chloroplast outer membrane, chloroplast stroma, cytoplasm, cytoplasmic vesicle, F1-F0 complex...

Browse Run Data

Only displaying annotations from Deposition CZCDP-10314: "Comprehensive semi-supervised automated annotations of macromolecules and organelles in C. reinhardtii tomograms"

Annotations

16 of 17 Annotations

Annotation Name	Deposition Date	Object Name	Object Shape Type	Method Type	Precision	Recall
0 Ground Truth Annotations
16 Other Annotations
76903 ribosome Annotation ID: AN-33542 Mart G. F. Last, ... , Thomas H. Sharp	2025-01-01	ribosome	Segmentation Mask		NA	NA
76901 chloroplast outer membrane Annotation ID: AN-33541 Mart G. F. Last, ... , Thomas H. Sharp	2025-01-01	chloroplast outer membrane	Segmentation Mask		NA	NA
76899 starch grain Annotation ID: AN-33540 Mart G. F. Last, ... , Thomas H. Sharp	2025-01-01	starch grain	Segmentation Mask		NA	NA
76897 cytoplasmic vesicle Annotation ID: AN-33539 Mart G. F. Last, ... , Thomas H. Sharp	2025-01-01	cytoplasmic vesicle	Segmentation Mask		NA	NA
76895 Golgi apparatus Annotation ID: AN-33538 Mart G. F. Last, ... , Thomas H. Sharp	2025-01-01	Golgi apparatus	Segmentation Mask		NA	NA
76893 lipid droplet Annotation ID: AN-33537 Mart G. F. Last, ... , Thomas H. Sharp	2025-01-01	lipid droplet	Segmentation Mask		NA	NA
76891 mitochondrion Annotation ID: AN-33536 Mart G. F. Last, ... , Thomas H. Sharp	2025-01-01	mitochondrion	Segmentation Mask		NA	NA
76889 cytoplasm Annotation ID: AN-33535 Mart G. F. Last, ... , Thomas H. Sharp	2025-01-01	cytoplasm	Segmentation Mask		NA	NA
76887 chloroplast stroma Annotation ID: AN-33534 Mart G. F. Last, ... , Thomas H. Sharp	2025-01-01	chloroplast stroma	Segmentation Mask		NA	NA
76885 thylakoid Annotation ID: AN-33533 Mart G. F. Last, ... , Thomas H. Sharp	2025-01-01	thylakoid	Segmentation Mask		NA	NA
76883 RubisCO complex Annotation ID: AN-33532 Mart G. F. Last, ... , Thomas H. Sharp	2025-01-01	RubisCO complex	Segmentation Mask		NA	NA
76881 F1-F0 complex Annotation ID: AN-33531 Mart G. F. Last, ... , Thomas H. Sharp	2025-01-01	F1-F0 complex	Segmentation Mask		NA	NA
76879 proteasome complex Annotation ID: AN-33530 Mart G. F. Last, ... , Thomas H. Sharp	2025-01-01	proteasome complex	Segmentation Mask		NA	NA
76877 chaperonin-containing T-complex Annotation ID: AN-33529 Mart G. F. Last, ... , Thomas H. Sharp	2025-01-01	chaperonin-containing T-complex	Segmentation Mask		NA	NA
76875 membrane Annotation ID: AN-33528 Mart G. F. Last, ... , Thomas H. Sharp	2025-01-01	membrane	Segmentation Mask		NA	NA
76873 ribosome Annotation ID: AN-33527 Mart G. F. Last, ... , Thomas H. Sharp	2025-01-01	ribosome	Segmentation Mask		NA	NA