All Depositions

Deposition

membrain-seg membrane predictions

  • Deposition ID:CZCDP-10303

Release Date: 2024-05-20

Last Modified: 2024-05-20

key visualization for membrain-seg membrane predictions

Photo Caption: Central slab of 4 representative tomograms with selected sets of annotations.

Deposition Overview

Membrane segmentations predicted using membrain-seg without rescaling and weights MemBrain_seg_v10_alpha.ckpt

Deposition Data

Annotations:14,382

Related Databases

Not Submitted

Annotation Methods Summary

Method Type

Automated

Method Links

Datasets with Deposition Data

287 of 287 Datasets

Dataset Name
Organism
Runs

With deposition data

Annotations

Deposition only

Annotated Objects

Deposition only

key visualization for Severe acute respiratory syndrome coronavirus 2

Dataset ID: DS-10006

  • Zunlong Ke,
  • Joaquin Oton,
  • Kun Qu,
  • ... ,
  • John Briggs
Severe acute respiratory syndrome coronavirus 2
156
156
  • membrane
key visualization for Bdellovibrio attack-phase

Dataset ID: DS-10155

  • Yi-Wei Chang,
  • Grant Jensen
Bdellovibrio bacteriovorus
105
105
  • membrane
key visualization for V. cholerae

Dataset ID: DS-10197

  • Martin Pilhofer,
  • Grant Jensen
Vibrio cholerae
85
85
  • membrane
key visualization for L. pneumophila JV1180_∆dotUF

Dataset ID: DS-10061

  • Debnath Ghosal,
  • Grant Jensen
Legionella pneumophila
96
96
  • membrane
key visualization for Vibrio cholerae (GFP-MreB)

Dataset ID: DS-10194

  • Matt Swulius,
  • Grant Jensen
Vibrio cholerae
32
32
  • membrane
key visualization for Campy FlhA(c) truncation

Dataset ID: DS-10204

  • Morgan Beeby,
  • Grant Jensen
Campylobacter jejuni
8
8
  • membrane
key visualization for H-pylori_dFliM_GC

Dataset ID: DS-10043

  • Mohammed Kaplan,
  • Grant Jensen
Helicobacter pylori
176
176
  • membrane
key visualization for Helicobacter_pylori_dFliG

Dataset ID: DS-10046

  • Mohammed Kaplan,
  • Grant Jensen
Helicobacter pylori
47
47
  • membrane
key visualization for G. hansenii gh2-2

Dataset ID: DS-10028

  • William Nicolas,
  • Grant Jensen
Gluconacetobacter hansenii
12
12
  • membrane
key visualization for M. magneticum dK203_8h_induced

Dataset ID: DS-10123

  • Poorna Subramanian,
  • Grant Jensen
Magnetospirillum magneticum
11
11
  • membrane
key visualization for M. magneticum magnetosome induced t4

Dataset ID: DS-10131

  • Poorna Subramanian,
  • Grant Jensen
Magnetospirillum magneticum
14
14
  • membrane
key visualization for L. pneumophila JV1644 Legionella thyA ∆dotO

Dataset ID: DS-10063

  • Debnath Ghosal,
  • Grant Jensen
Legionella pneumophila
120
120
  • membrane
key visualization for L. pneumophila Legionella IcmQ71::TevS 30C_Off

Dataset ID: DS-10089

  • Debnath Ghosal,
  • Grant Jensen
Legionella pneumophila
35
35
  • membrane
key visualization for M. magneticum magnetosome induced t6

Dataset ID: DS-10132

  • Poorna Subramanian,
  • Grant Jensen
Magnetospirillum magneticum
4
4
  • membrane
key visualization for L. pneumophila JV7091_∆dotEP

Dataset ID: DS-10079

  • Debnath Ghosal,
  • Grant Jensen
Legionella pneumophila
122
122
  • membrane
key visualization for G. hansenii gh2-4

Dataset ID: DS-10029

  • William Nicolas,
  • Grant Jensen
Gluconacetobacter hansenii
9
9
  • membrane
key visualization for M. magneticum dK203_3h_induced

Dataset ID: DS-10122

  • Poorna Subramanian,
  • Grant Jensen
Magnetospirillum magneticum
13
13
  • membrane
key visualization for VSVGpNL4GFP entry HUVECs

Dataset ID: DS-10187

  • Cora Woodward,
  • Grant Jensen
Homo sapiens
51
51
  • membrane
key visualization for S. typhimurium  FliL deletion (plus T3SS)

Dataset ID: DS-10226

  • Morgan Beeby,
  • Grant Jensen
Salmonella typhimurium
36
36
  • membrane
key visualization for L. pneumophila Legionella_delta-lspHIJK

Dataset ID: DS-10093

  • Debnath Ghosal,
  • Grant Jensen
Legionella pneumophila
115
115
  • membrane
  • 1
  • 2
  • 3
  • 4
  • 5
  • 15