All Depositions

Deposition

TARDIS membrane predictions

  • Deposition ID:CZCDP-10301

Release Date: 2024-02-20

Last Modified: 2024-02-20

key visualization for TARDIS membrane predictions

Deposition Overview

Voxel-based and instance segmentations of membranes predicted using TARDIS.

Authors

Robert Kiewisz, Tristan Bepler

Deposition Data

Annotations:12,969

Related Databases

Not Submitted

Annotation Methods Summary

Method Type

Automated

Method Links

Datasets with Deposition Data

295 of 295 Datasets

Dataset Name

Organism

Runs

With deposition data

Annotations

Deposition only

Annotated Objects

Deposition only

key visualization for Severe acute respiratory syndrome coronavirus 2

Severe acute respiratory syndrome coronavirus 2

Dataset ID: DS-10006

Zunlong Ke, Joaquin Oton, Kun Qu, ... , John Briggs

Severe acute respiratory syndrome coronavirus 2

156

156
  • membrane
  • SARS-CoV2 spike protein
key visualization for 70S ribosome with chloramphenicol

70S ribosome with chloramphenicol

Dataset ID: DS-10003

Tegunov Dimitry, Xue Liang, ... , Cramer Patrick, Julia Mahamid

Mycoplasma pneumoniae

65

65
  • cytosolic ribosome
  • membrane
key visualization for H.pylori 26695 delta-PAI / AGS

H.pylori 26695 delta-PAI / AGS

Dataset ID: DS-10149

Yi-Wei Chang, Grant Jensen

Helicobacter pylori

37

37
  • membrane
key visualization for Microtubule doublet from mouse sperm

Microtubule doublet from mouse sperm

Dataset ID: DS-10005

Zhen Chen, ... , Ronald D. Vale, David A. Agard

Mus musculus

39

39
  • membrane
  • microtubule doublet 48 nm repeat
  • microtubule doublet 96 nm repeat
key visualization for Vibrio delta-CheA1

Vibrio delta-CheA1

Dataset ID: DS-10274

Ariane Briegel, Grant Jensen

Vibrio cholerae

28

28
  • membrane
key visualization for Sulfolobus solfac.P2+STIV 24 hour Post infection

Sulfolobus solfac.P2+STIV 24 hour Post infection

Dataset ID: DS-10114

Rasika Ramdasi, Grant Jensen

Sulfolobus solfataricus

21

21
  • membrane
key visualization for HUVECs-pNLGFP-VPS4DN

HUVECs-pNLGFP-VPS4DN

Dataset ID: DS-10186

Cora Woodward, Grant Jensen

Homo sapiens

22

22
  • membrane
key visualization for V. cholerae delta CheA1,2,3

V. cholerae delta CheA1,2,3

Dataset ID: DS-10263

Ariane Briegel, Grant Jensen

Vibrio cholerae

18

18
  • membrane
key visualization for L. pneumophila JV3579_inPolara

L. pneumophila JV3579_inPolara

Dataset ID: DS-10071

Debnath Ghosal, Grant Jensen

Legionella pneumophila

71

71
  • membrane
key visualization for M. pneumoniae MP PrkC 27.5KX

M. pneumoniae MP PrkC 27.5KX

Dataset ID: DS-10296

Jian Shi, Grant Jensen

Mycoplasma pneumoniae

62

62
  • membrane
key visualization for Cryo-sectioned Jurkat VSVG-pNL4GFP

Cryo-sectioned Jurkat VSVG-pNL4GFP

Dataset ID: DS-10170

Cora Woodward, Grant Jensen

Homo sapiens

35

35
  • membrane
key visualization for G. hansenii gh7-2

G. hansenii gh7-2

Dataset ID: DS-10032

William Nicolas, Grant Jensen

Gluconacetobacter hansenii

4

4
  • membrane
key visualization for E. coli pLE7_1mM_IPTG

E. coli pLE7_1mM_IPTG

Dataset ID: DS-10193

Matt Swulius, Grant Jensen

Escherichia coli

15

15
  • membrane
key visualization for T. primitia proteinase K

T. primitia proteinase K

Dataset ID: DS-10252

Elitza Tocheva, Grant Jensen

Treponema primitia

18

18
  • membrane
key visualization for G. hansenii gh6-3

G. hansenii gh6-3

Dataset ID: DS-10031

William Nicolas, Grant Jensen

Gluconacetobacter hansenii

1

1
  • membrane
key visualization for G. hansenii gh7-3

G. hansenii gh7-3

Dataset ID: DS-10033

William Nicolas, Grant Jensen

Gluconacetobacter hansenii

6

6
  • membrane
key visualization for Pseudomonas aeruginosa

Pseudomonas aeruginosa

Dataset ID: DS-10040

Mohammed Kaplan, Grant Jensen

Pseudomonas aeruginosa

125

125
  • membrane
key visualization for Pseudomonas aeruginosa_JT2944

Pseudomonas aeruginosa_JT2944

Dataset ID: DS-10041

Mohammed Kaplan, Grant Jensen

Pseudomonas aeruginosa

80

80
  • membrane
key visualization for WT Salmonella minicell-producing strain 17261, 5hr growth

WT Salmonella minicell-producing strain 17261, 5hr growth

Dataset ID: DS-10238

Morgan Beeby, Grant Jensen

Salmonella typhimurium

9

9
  • membrane
key visualization for Paeruginosa_dfliG

Paeruginosa_dfliG

Dataset ID: DS-10039

Mohammed Kaplan, Grant Jensen

Pseudomonas aeruginosa

23

23
  • membrane
  • 1
  • 2
  • 3
  • 4
  • 5
  • 15