Deposition

Surface morphometrics of organellar membranes

Deposition ID:CZCDP-10010

Release Date: 2023-12-01

Last Modified: 2023-12-01

key visualization for Surface morphometrics of organellar membranes

Photo Caption: Central slab of 4 representative tomograms with selected sets of annotations.

Deposition Overview

This dataset contains cryo-electron tomograms of mouse embryonic fibroblasts from FIB-SEM lamella. The dataset was used to develop and evaluate a surface morphometrics pipeline to quantify organellar membrane ultrastructure.

Authors

Deposition Data

Annotations:88

Publications

DOI:10.1083/jcb.202204093
DOI:10.1101/2022.01.23.477440

Related Databases

EMPIAR ID:EMPIAR-11370

Methods Summary

Annotations	Method Type	Method Details	Method Links

Deposited Data

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Data Contents

Tilt SeriesAvailable

FramesNA

CTFNA

AlignmentAvailable

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88 of 88 Annotations

Annotation Name	Object Shape Type	Method Type	Deposited In
101mitochondrial inner membrane Annotation ID: AN-2260 Ground Truth	SegmentationMask	Hybrid	Dataset: Organellar membranes Run: UF6
100mitochondrial outer membrane Annotation ID: AN-2259 Ground Truth	SegmentationMask	Hybrid	Dataset: Organellar membranes Run: UF6
101mitochondrial inner membrane Annotation ID: AN-2258 Ground Truth	SegmentationMask	Hybrid	Dataset: Organellar membranes Run: UF5
100mitochondrial outer membrane Annotation ID: AN-2257 Ground Truth	SegmentationMask	Hybrid	Dataset: Organellar membranes Run: UF5
101mitochondrial inner membrane Annotation ID: AN-2256 Ground Truth	SegmentationMask	Hybrid	Dataset: Organellar membranes Run: UF4
100mitochondrial outer membrane Annotation ID: AN-2255 Ground Truth	SegmentationMask	Hybrid	Dataset: Organellar membranes Run: UF4
101mitochondrial inner membrane Annotation ID: AN-2254 Ground Truth	SegmentationMask	Hybrid	Dataset: Organellar membranes Run: UF2
100mitochondrial outer membrane Annotation ID: AN-2253 Ground Truth	SegmentationMask	Hybrid	Dataset: Organellar membranes Run: UF2
101mitochondrial inner membrane Annotation ID: AN-2252 Ground Truth	SegmentationMask	Hybrid	Dataset: Organellar membranes Run: UF1
100mitochondrial outer membrane Annotation ID: AN-2251 Ground Truth	SegmentationMask	Hybrid	Dataset: Organellar membranes Run: UF1
101mitochondrial inner membrane Annotation ID: AN-2250 Ground Truth	SegmentationMask	Hybrid	Dataset: Organellar membranes Run: UE8
100mitochondrial outer membrane Annotation ID: AN-2249 Ground Truth	SegmentationMask	Hybrid	Dataset: Organellar membranes Run: UE8
101mitochondrial inner membrane Annotation ID: AN-2248 Ground Truth	SegmentationMask	Hybrid	Dataset: Organellar membranes Run: UE7
100mitochondrial outer membrane Annotation ID: AN-2247 Ground Truth	SegmentationMask	Hybrid	Dataset: Organellar membranes Run: UE7
101mitochondrial inner membrane Annotation ID: AN-2246 Ground Truth	SegmentationMask	Hybrid	Dataset: Organellar membranes Run: UE6
100mitochondrial outer membrane Annotation ID: AN-2245 Ground Truth	SegmentationMask	Hybrid	Dataset: Organellar membranes Run: UE6
101mitochondrial inner membrane Annotation ID: AN-2244 Ground Truth	SegmentationMask	Hybrid	Dataset: Organellar membranes Run: UE5
100mitochondrial outer membrane Annotation ID: AN-2243 Ground Truth	SegmentationMask	Hybrid	Dataset: Organellar membranes Run: UE5
101mitochondrial inner membrane Annotation ID: AN-2242 Ground Truth	SegmentationMask	Hybrid	Dataset: Organellar membranes Run: UE4
100mitochondrial outer membrane Annotation ID: AN-2241 Ground Truth	SegmentationMask	Hybrid	Dataset: Organellar membranes Run: UE4