Deposition

Architecture of the Chlamydomonas reinhardtii ciliary base

Deposition ID:CZCDP-10009

Release Date: 2023-12-01

Last Modified: 2023-11-30

key visualization for Architecture of the Chlamydomonas reinhardtii ciliary base

Photo Caption: Central slab of 4 representative tomograms with selected sets of annotations.

Deposition Overview

Cryo-electron tomograms of FIB-SEM lamellas of the Chlamydomonas reinhardtii ciliary base, including annotations of the intraflagellar transport machinery, refined using STOPGAP.

Authors

Deposition Data

Annotations:140

Publications

DOI:10.1126/science.abm6704

Related Databases

EMPIAR ID:EMPIAR-11078

Methods Summary

Annotations	Method Type	Method Details	Method Links

Deposited Data

Group by

Data Contents

Tilt SeriesAvailable

FramesAvailable

CTFNA

AlignmentAvailable

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140 of 140 Annotations

Annotation Name	Object Shape Type	Method Type	Deposited In
111IFT A complex Annotation ID: AN-31134 Ground Truth	OrientedPoint	Manual	Dataset: C. reinhardtii ciliary transition zone Run: 9
110IFT B complex Annotation ID: AN-31133 Ground Truth	OrientedPoint	Manual	Dataset: C. reinhardtii ciliary transition zone Run: 9
109Y-shaped link Annotation ID: AN-31132 Ground Truth	OrientedPoint	Manual	Dataset: C. reinhardtii ciliary transition zone Run: 9
111IFT A complex Annotation ID: AN-31131 Ground Truth	OrientedPoint	Manual	Dataset: C. reinhardtii ciliary transition zone Run: 8
110IFT B complex Annotation ID: AN-31130 Ground Truth	OrientedPoint	Manual	Dataset: C. reinhardtii ciliary transition zone Run: 8
109Y-shaped link Annotation ID: AN-31129 Ground Truth	OrientedPoint	Manual	Dataset: C. reinhardtii ciliary transition zone Run: 8
111IFT A complex Annotation ID: AN-31128 Ground Truth	OrientedPoint	Manual	Dataset: C. reinhardtii ciliary transition zone Run: 7
110IFT B complex Annotation ID: AN-31127 Ground Truth	OrientedPoint	Manual	Dataset: C. reinhardtii ciliary transition zone Run: 7
109Y-shaped link Annotation ID: AN-31126 Ground Truth	OrientedPoint	Manual	Dataset: C. reinhardtii ciliary transition zone Run: 7
111IFT A complex Annotation ID: AN-31125 Ground Truth	OrientedPoint	Manual	Dataset: C. reinhardtii ciliary transition zone Run: 6
110IFT B complex Annotation ID: AN-31124 Ground Truth	OrientedPoint	Manual	Dataset: C. reinhardtii ciliary transition zone Run: 6
109Y-shaped link Annotation ID: AN-31123 Ground Truth	OrientedPoint	Manual	Dataset: C. reinhardtii ciliary transition zone Run: 6
111IFT A complex Annotation ID: AN-31122 Ground Truth	OrientedPoint	Manual	Dataset: C. reinhardtii ciliary transition zone Run: 5
110IFT B complex Annotation ID: AN-31121 Ground Truth	OrientedPoint	Manual	Dataset: C. reinhardtii ciliary transition zone Run: 5
109Y-shaped link Annotation ID: AN-31120 Ground Truth	OrientedPoint	Manual	Dataset: C. reinhardtii ciliary transition zone Run: 5
111IFT A complex Annotation ID: AN-31119 Ground Truth	OrientedPoint	Manual	Dataset: C. reinhardtii ciliary transition zone Run: 4
110IFT B complex Annotation ID: AN-31118 Ground Truth	OrientedPoint	Manual	Dataset: C. reinhardtii ciliary transition zone Run: 4
109Y-shaped link Annotation ID: AN-31117 Ground Truth	OrientedPoint	Manual	Dataset: C. reinhardtii ciliary transition zone Run: 4
111IFT A complex Annotation ID: AN-31116 Ground Truth	OrientedPoint	Manual	Dataset: C. reinhardtii ciliary transition zone Run: 3
110IFT B complex Annotation ID: AN-31115 Ground Truth	OrientedPoint	Manual	Dataset: C. reinhardtii ciliary transition zone Run: 3