Datasets

Datasets contain data such as annotations, tomograms, frames, tilt series, and metadata such as CTF and alignment from a single set of experimental conditions Learn More

344 of 344 Datasets

Dataset Name	EMPIAR ID	Organism Name	Runs	Objects
CZII 2-protein phantom (version 1.0) with defocus-based imaging Dataset ID: DS-10468 Yue Yu, Mallak Ali, Mohammadreza Paraan, Elizabeth Montabana, ...	--	not_reported	197	cytosolic ribosome GT membrane virus-like capsid GT
CZII 2-protein phantom (version 1.0) with the Volta Phase Plate Dataset ID: DS-10469 Yue Yu, Mallak Ali, Mohammadreza Paraan, Elizabeth Montabana, ...	--	not_reported	115	cytosolic ribosome membrane virus-like capsid
Large-scale cryo-ET dataset of affinity-captured organelles (LAMP1 + SpyCatcher 10nm Gold) HEK293T cells Dataset ID: DS-10458 Rahel Woldeyes, Hannah Siems, Bisco Hill, ... , Daniel Serwas	--	Homo sapiens	73	intracellular membrane-bounded organelle membrane
Large-scale cryo-ET dataset of affinity-captured organelles (LAMP1 + untreated) HEK293T cells Dataset ID: DS-10444 Rahel Woldeyes, Hannah Siems, Bisco Hill, ... , Daniel Serwas	--	Homo sapiens	126	intracellular membrane-bounded organelle membrane
Large-scale cryo-ET dataset of affinity-captured organelles (LAMP1 + untreated) HEK293T cells Dataset ID: DS-10457 Rahel Woldeyes, Hannah Siems, Bisco Hill, ... , Daniel Serwas	--	Homo sapiens	941	intracellular membrane-bounded organelle membrane
Large-scale cryo-ET dataset of affinity-captured organelles (TMEM192 + Bafilomycin A1) HEK293T cells Dataset ID: DS-10459 Rahel Woldeyes, Hannah Siems, Bisco Hill, ... , Daniel Serwas	--	Homo sapiens	892	intracellular membrane-bounded organelle membrane
Large-scale cryo-ET dataset of affinity-captured organelles (TMEM192 + Bafilomycin + mLST8 SpyCatcher-Gold) HEK293T cells Dataset ID: DS-10463 Rahel Woldeyes, Hannah Siems, Bisco Hill, ... , Daniel Serwas	--	Homo sapiens	1,361	intracellular membrane-bounded organelle membrane
Large-scale cryo-ET dataset of affinity-captured organelles (TMEM192 + Bafilomycin + V1A SidK-Gold) HEK293T cells Dataset ID: DS-10461 Rahel Woldeyes, Hannah Siems, Bisco Hill, ... , Daniel Serwas	--	Homo sapiens	1,991	intracellular membrane-bounded organelle membrane
Large-scale cryo-ET dataset of affinity-captured organelles (TMEM192 + Bafilomycin + V1A SpyCatcher-Gold) HEK293T cells Dataset ID: DS-10462 Rahel Woldeyes, Hannah Siems, Bisco Hill, ... , Daniel Serwas	--	Homo sapiens	2,133	intracellular membrane-bounded organelle membrane
Large-scale cryo-ET dataset of affinity-captured organelles (TMEM192 + Starvation + Negative Control) HEK293T cells Dataset ID: DS-10467 Rahel Woldeyes, Hannah Siems, Bisco Hill, ... , Daniel Serwas	--	Homo sapiens	294	intracellular membrane-bounded organelle membrane
Large-scale cryo-ET dataset of affinity-captured organelles (TMEM192 + Starvation/Stimulation + Dual Labeling) HEK293T cells Dataset ID: DS-10464 Rahel Woldeyes, Hannah Siems, Bisco Hill, ... , Daniel Serwas	--	Homo sapiens	861	intracellular membrane-bounded organelle membrane
Large-scale cryo-ET dataset of affinity-captured organelles (TMEM192 + Starvation/Stimulation + RagC SpyCatcher-Gold) HEK293T cells Dataset ID: DS-10465 Rahel Woldeyes, Hannah Siems, Bisco Hill, ... , Daniel Serwas	--	Homo sapiens	790	intracellular membrane-bounded organelle membrane
Large-scale cryo-ET dataset of affinity-captured organelles (TMEM192 + Starvation + V1A SidK-Gold) HEK293T cells Dataset ID: DS-10460 Rahel Woldeyes, Hannah Siems, Bisco Hill, ... , Daniel Serwas	--	Homo sapiens	1,704	intracellular membrane-bounded organelle membrane
Large-scale cryo-ET dataset of affinity-captured organelles (TMEM192 + Starvation + V1A SpyCatcher-Gold) HEK293T cells Dataset ID: DS-10466 Rahel Woldeyes, Hannah Siems, Bisco Hill, ... , Daniel Serwas	--	Homo sapiens	2,528	intracellular membrane-bounded organelle membrane
CryoET of NPC1-Deficient Human HEK293T Cells with Annotations for Multiple Cellular Features Dataset ID: DS-10456 Hannah Siems, Garrett Greenan, ... , Daniel Serwas	--	Homo sapiens	4	cytosolic ribosome lysosome membrane Total 5 Objects
CryoET of isolated synaptic vesicles from mouse brain Dataset ID: DS-10453 Uljana Kravčenko, ... , Mikhail Kudryashev	EMPIAR-12794	Mus musculus	95	clathrin coat GT clathrin complex GT proton-transporting V-type ATPase complex GT proton-transporting V-type ATPase, V0 domain GT
PP7 virus-like particles in E.Coli at 3.3 Å Dataset ID: DS-10455 Mallak Ali, ... , Mohammadreza Paraan	--	Escherichia coli BL21(DE3)	314	Capsid protein GT membrane
CryoLens - simulated training data Dataset ID: DS-10454 Kyle I. S. Harrington, ... , Alan R. Lowe	--	not_reported	200	60 kDa heat shock protein, mitochondrial GT acetolactate synthase complex GT Acetyl-CoA carboxylase GT Total 99 Objects
CryoET (with Volta phase plate) of near-minimal cells Mycoplasma mycoides JCVI-Syn3A for the development of subtomogram averaging pipelines Dataset ID: DS-10452 Mallak Ali, Ariana Peck, Yue Yu, Jonathan Schwartz, ... , Mohammadreza Paraan	--	Mycoplasma mycoides subsp. capri str. GM12	107	membrane
CZII - CryoET Object Identification Challenge - Private Test Dataset Dataset ID: DS-10446 Ariana Peck, Yue Yu, Jonathan Schwartz, ... , Kyle I. S. Harrington, Mohammadreza Paraan	--	not_reported	364	Beta-amylase GT Beta-galactosidase GT cytosolic ribosome GT Total 7 Objects