All Datasets Dataset: In situ cryo-ET dataset of Chlamydomonas reinhardtii prepared using cryo-plasmaFIB milling

Run

01122021_BrnoKrios_arctis_lam1_pos4

Run ID:RN-14069

Release Date: 2024-04-09

Last Modified: 2024-04-09

key visualization for 01122021_BrnoKrios_arctis_lam1_pos4

Run Overview

Data Summary

Frames:Available
Tilt Series:Available
Alignment:Available
Tomograms:1
Annotations:20

Tilt Series

Tilt Quality	5 - Excellent
Tilt Range	102° (-52.01° to 49.99°)
Tilt Scheme	dose-symmetric

Tomogram

Samplings Available	7.84Å
Tomogram Processing	denoised
Annotated Objects	cell wall, chaperonin-containing T-complex, chloroplast stroma, cilium, cytoplasm, cytoplasmic vesicle...

Browse Run Data

Only displaying annotations from Deposition CZCDP-10314: "Comprehensive semi-supervised automated annotations of macromolecules and organelles in C. reinhardtii tomograms"

Annotations

16 of 20 Annotations

Annotation Name	Deposition Date	Object Name	Object Shape Type	Method Type	Precision	Recall
0 Ground Truth Annotations
16 Other Annotations
76647 ribosome Annotation ID: AN-33414 Mart G. F. Last, ... , Thomas H. Sharp	2025-01-01	ribosome	Segmentation Mask		NA	NA
76049 starch grain Annotation ID: AN-33115 Mart G. F. Last, ... , Thomas H. Sharp	2025-01-01	starch grain	Segmentation Mask		NA	NA
76047 cilium Annotation ID: AN-33114 Mart G. F. Last, ... , Thomas H. Sharp	2025-01-01	cilium	Segmentation Mask		NA	NA
76045 cell wall Annotation ID: AN-33113 Mart G. F. Last, ... , Thomas H. Sharp	2025-01-01	cell wall	Segmentation Mask		NA	NA
76043 cytoplasmic vesicle Annotation ID: AN-33112 Mart G. F. Last, ... , Thomas H. Sharp	2025-01-01	cytoplasmic vesicle	Segmentation Mask		NA	NA
76041 endoplasmic reticulum Annotation ID: AN-33111 Mart G. F. Last, ... , Thomas H. Sharp	2025-01-01	endoplasmic reticulum	Segmentation Mask		NA	NA
76039 chloroplast stroma Annotation ID: AN-33110 Mart G. F. Last, ... , Thomas H. Sharp	2025-01-01	chloroplast stroma	Segmentation Mask		NA	NA
76037 nucleoplasm Annotation ID: AN-33109 Mart G. F. Last, ... , Thomas H. Sharp	2025-01-01	nucleoplasm	Segmentation Mask		NA	NA
76035 mitochondrion Annotation ID: AN-33108 Mart G. F. Last, ... , Thomas H. Sharp	2025-01-01	mitochondrion	Segmentation Mask		NA	NA
76033 cytoplasm Annotation ID: AN-33107 Mart G. F. Last, ... , Thomas H. Sharp	2025-01-01	cytoplasm	Segmentation Mask		NA	NA
76031 RubisCO complex Annotation ID: AN-33106 Mart G. F. Last, ... , Thomas H. Sharp	2025-01-01	RubisCO complex	Segmentation Mask		NA	NA
76029 F1-F0 complex Annotation ID: AN-33105 Mart G. F. Last, ... , Thomas H. Sharp	2025-01-01	F1-F0 complex	Segmentation Mask		NA	NA
76027 proteasome complex Annotation ID: AN-33104 Mart G. F. Last, ... , Thomas H. Sharp	2025-01-01	proteasome complex	Segmentation Mask		NA	NA
76025 chaperonin-containing T-complex Annotation ID: AN-33103 Mart G. F. Last, ... , Thomas H. Sharp	2025-01-01	chaperonin-containing T-complex	Segmentation Mask		NA	NA
76023 membrane Annotation ID: AN-33102 Mart G. F. Last, ... , Thomas H. Sharp	2025-01-01	membrane	Segmentation Mask		NA	NA
76021 ribosome Annotation ID: AN-33101 Mart G. F. Last, ... , Thomas H. Sharp	2025-01-01	ribosome	Segmentation Mask		NA	NA