Dataset
Arabidopsis thaliana pollen tubes
- Dataset ID:DS-10479
Release Date: 2026-04-28
Last Modified: 2026-04-28

Photo Caption: Central slab from a representative tomogram of a Arabidopsis thaliana sample.
Dataset Overview
Collection of cryo-electron tomograms acquired on cryo-FIB-milled lamellae of germinated Arabidopsis thaliana pollen tubes. Lamellae were milled at various distances from the pollen tube tip and reveal dense networks of vesicles and lipid droplets, organelles such as Golgi, endoplasmic reticulum and vacuoles, and the surrounding cell wall. Tilt series were collected on a 300 kV TFS Krios with a Gatan K3 camera using SerialEM with dose-symmetric or bi-directional tilt schemes. Tomograms were reconstructed in IMOD with a SIRT-like filter applied to a weighted back-projection reconstruction.
Publications
Not Submitted
Related Databases
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Runs
47 of 47 Runs
Run Name | Tilt Series Quality Score | Objects | ||
|---|---|---|---|---|
pol5-1_lam1_ts2 Run ID: RN-34435 | 2 - Poor | -- | ||
pol5-1_lam1_ts3 Run ID: RN-34436 | 2 - Poor | -- | ||
pol5-1_lam1_ts4 Run ID: RN-34437 | 1 - Very Poor | -- | ||
pol5-2_lam1_ts1 Run ID: RN-34438 | 4 - Good |
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pol5-2_lam1_ts2 Run ID: RN-34439 | 4 - Good |
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pol5-2_lam1_ts3 Run ID: RN-34440 | 3 - Moderate |
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pol5-2_lam1_ts4 Run ID: RN-34441 | 3 - Moderate |
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pol5-2_lam1_ts5 Run ID: RN-34442 | 4 - Good |
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pol5-2_lam1_ts6 Run ID: RN-34443 | 2 - Poor | -- | ||
pol5-2_lam1_ts7 Run ID: RN-34444 | 4 - Good |
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pol5-2_lam1_ts8 Run ID: RN-34445 | 3 - Moderate |
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pol5-2_lam1_ts9 Run ID: RN-34446 | 2 - Poor |
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pol6-3_lam1_ts1 Run ID: RN-34447 | 1 - Very Poor | -- | ||
pol6-3_lam1_ts2 Run ID: RN-34448 | 3 - Moderate | -- | ||
pol6-3_lam2_ts1 Run ID: RN-34449 | 1 - Very Poor | -- | ||
pol6-3_lam2_ts2 Run ID: RN-34450 | 1 - Very Poor | -- | ||
pol7-4_lam1_ts1 Run ID: RN-34451 | 5 - Excellent |
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pol7-4_lam1_ts10 Run ID: RN-34452 | 1 - Very Poor | -- | ||
pol7-4_lam1_ts11 Run ID: RN-34453 | 5 - Excellent |
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pol7-4_lam1_ts2 Run ID: RN-34454 | 5 - Excellent |
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