Cryo-electron tomography of centrosomes in C. elegans embryonic cells

  • Dataset ID:DS-10477

Release Date: 2026-03-26

Last Modified: 2026-03-26

key visualization for Cryo-electron tomography of centrosomes in C. elegans embryonic cells

Photo Caption: Central slab from a representative tomogram of a Caenorhabditis elegans sample with selected set of annotations.

Dataset Overview

Cryo-electron tomography data of centrosomes in dissociated C. elegans embryonic cells across the cell cycle. Centrosomes were visualized in cells isolated from early-stage embryos (strain JWW69 expressing GFP::SPD-5 and H2B::mCherry). Cells were plunge-frozen, thinned by cryo-FIB milling, and imaged on a 300 kV Titan Krios with a K2 Summit detector, Volta phase plate, and energy filter. 12 tomograms were collected at centrosomes in interphase, prophase, metaphase, anaphase, and telophase stages. Comprehensive annotations of centrioles, microtubules, ribosomes, membranes, and pericentriolar material are provided. Tilt series were aligned using patch tracking in IMOD, and tomograms were reconstructed using Warp.

Related Databases

Runs

12 of 12 Runs

Run Name
Tilt Series Quality Score
Objects
key visualization for cent1
cent1

Run ID: RN-33577

2 - Poor
  • centriole
    GT
  • cytosolic ribosome
    GT
  • membrane
    GT
  • Total 5 Objects
key visualization for cent10
cent10

Run ID: RN-33578

5 - Excellent
  • centriole
    GT
  • cytosolic ribosome
    GT
  • membrane
    GT
  • microtubule
    GT
key visualization for cent11
cent11

Run ID: RN-33579

3 - Moderate
  • centriole
    GT
  • cytosolic ribosome
    GT
  • membrane
    GT
  • Total 5 Objects
key visualization for cent12
cent12

Run ID: RN-33580

5 - Excellent
  • centriole
    GT
  • cytosolic ribosome
    GT
  • membrane
    GT
  • microtubule
    GT
key visualization for cent2
cent2

Run ID: RN-33581

5 - Excellent
  • centriole
    GT
  • cytosolic ribosome
    GT
  • membrane
    GT
  • Total 5 Objects
key visualization for cent3
cent3

Run ID: RN-33582

5 - Excellent
  • centriole
    GT
  • cytosolic ribosome
    GT
  • membrane
    GT
  • microtubule
    GT
key visualization for cent4
cent4

Run ID: RN-33583

5 - Excellent
  • centriole
    GT
  • cytosolic ribosome
    GT
  • membrane
    GT
  • microtubule
    GT
key visualization for cent5
cent5

Run ID: RN-33584

5 - Excellent
  • centriole
    GT
  • cytosolic ribosome
    GT
  • membrane
    GT
  • Total 5 Objects
key visualization for cent6
cent6

Run ID: RN-33585

5 - Excellent
  • centriole
    GT
  • cytosolic ribosome
    GT
  • membrane
    GT
  • Total 5 Objects
key visualization for cent7
cent7

Run ID: RN-33586

4 - Good
  • cytosolic ribosome
    GT
  • membrane
    GT
  • microtubule
    GT
  • pericentriolar material
    GT
key visualization for cent8
cent8

Run ID: RN-33587

3 - Moderate
  • centriole
    GT
  • cytosolic ribosome
    GT
  • membrane
    GT
  • Total 5 Objects
key visualization for cent9
cent9

Run ID: RN-33588

3 - Moderate
  • cytosolic ribosome
    GT
  • membrane
    GT
  • microtubule
    GT