CZII - CryoET Object Identification Challenge - Private Test Dataset

  • Dataset ID:DS-10446

Release Date: 2025-02-25

Last Modified: 2025-02-25

key visualization for CZII - CryoET Object Identification Challenge - Private Test Dataset

Photo Caption: Central slab from a representative tomogram of the in vitro sample with selected set of annotations.

Dataset Overview

This dataset is comprised of movie stacks, tiltseries, alignments, tomograms and hand-curated ground truth annotations for the purpose of training object identification algorithms in the context of the CryoET Object Identification Challenge. The data was acquired on a Krios G4 using a Falcon 4i detector and SelctrisX energy filter. Tomograms were aligned using AreTomo3 v1.0.20, reconstructed using AreTomo3 v2.0.10 and post-processed using different methods. Each run provides denoised and ctf corrected tomograms. The labels were curated as described in the accompanying paper and include point labels for Apo-ferritin, Beta-amylase, Beta-galactosidase, cytosolic ribosomes, thyroglobulin and VLP. Private leaderboard scores on Kaggle were computed based on this dataset.

Authors

Related Databases

Runs

364 of 364 Runs

Run Name
Tilt Series Quality Score
Annotated Objects
key visualization for TS_100_4
TS_100_4

Run ID: RN-17803

5 - Excellent
  • Beta-amylase
    GT
  • Beta-galactosidase
    GT
  • cytosolic ribosome
    GT
  • Total 7 Objects
key visualization for TS_100_6
TS_100_6

Run ID: RN-17804

5 - Excellent
  • Beta-amylase
    GT
  • Beta-galactosidase
    GT
  • cytosolic ribosome
    GT
  • Total 7 Objects
key visualization for TS_100_7
TS_100_7

Run ID: RN-17805

5 - Excellent
  • Beta-amylase
    GT
  • Beta-galactosidase
    GT
  • cytosolic ribosome
    GT
  • Total 7 Objects
key visualization for TS_100_9
TS_100_9

Run ID: RN-17806

5 - Excellent
  • Beta-amylase
    GT
  • Beta-galactosidase
    GT
  • cytosolic ribosome
    GT
  • Total 7 Objects
key visualization for TS_101_1
TS_101_1

Run ID: RN-17807

5 - Excellent
  • Beta-amylase
    GT
  • Beta-galactosidase
    GT
  • cytosolic ribosome
    GT
  • Total 7 Objects
key visualization for TS_101_4
TS_101_4

Run ID: RN-17808

5 - Excellent
  • Beta-amylase
    GT
  • Beta-galactosidase
    GT
  • cytosolic ribosome
    GT
  • Total 7 Objects
key visualization for TS_101_6
TS_101_6

Run ID: RN-17809

5 - Excellent
  • Beta-amylase
    GT
  • Beta-galactosidase
    GT
  • cytosolic ribosome
    GT
  • Total 7 Objects
key visualization for TS_101_7
TS_101_7

Run ID: RN-17810

5 - Excellent
  • Beta-amylase
    GT
  • Beta-galactosidase
    GT
  • cytosolic ribosome
    GT
  • Total 7 Objects
key visualization for TS_101_9
TS_101_9

Run ID: RN-17811

5 - Excellent
  • Beta-amylase
    GT
  • Beta-galactosidase
    GT
  • cytosolic ribosome
    GT
  • Total 7 Objects
key visualization for TS_102_1
TS_102_1

Run ID: RN-17812

5 - Excellent
  • Beta-amylase
    GT
  • Beta-galactosidase
    GT
  • cytosolic ribosome
    GT
  • Total 7 Objects
key visualization for TS_102_4
TS_102_4

Run ID: RN-17813

5 - Excellent
  • Beta-amylase
    GT
  • Beta-galactosidase
    GT
  • cytosolic ribosome
    GT
  • Total 7 Objects
key visualization for TS_102_7
TS_102_7

Run ID: RN-17814

5 - Excellent
  • Beta-amylase
    GT
  • Beta-galactosidase
    GT
  • cytosolic ribosome
    GT
  • Total 7 Objects
key visualization for TS_102_8
TS_102_8

Run ID: RN-17815

5 - Excellent
  • Beta-amylase
    GT
  • Beta-galactosidase
    GT
  • cytosolic ribosome
    GT
  • Total 7 Objects
key visualization for TS_103_1
TS_103_1

Run ID: RN-17816

5 - Excellent
  • Beta-amylase
    GT
  • Beta-galactosidase
    GT
  • cytosolic ribosome
    GT
  • Total 7 Objects
key visualization for TS_103_2
TS_103_2

Run ID: RN-17817

5 - Excellent
  • Beta-amylase
    GT
  • Beta-galactosidase
    GT
  • cytosolic ribosome
    GT
  • Total 7 Objects
key visualization for TS_103_3
TS_103_3

Run ID: RN-17818

5 - Excellent
  • Beta-amylase
  • Beta-galactosidase
    GT
  • cytosolic ribosome
    GT
  • Total 7 Objects
key visualization for TS_103_9
TS_103_9

Run ID: RN-17819

5 - Excellent
  • Beta-amylase
    GT
  • Beta-galactosidase
    GT
  • cytosolic ribosome
    GT
  • Total 7 Objects
key visualization for TS_104_1
TS_104_1

Run ID: RN-17820

5 - Excellent
  • Beta-amylase
    GT
  • Beta-galactosidase
    GT
  • cytosolic ribosome
    GT
  • Total 7 Objects
key visualization for TS_104_2
TS_104_2

Run ID: RN-17821

5 - Excellent
  • Beta-amylase
    GT
  • Beta-galactosidase
  • cytosolic ribosome
    GT
  • Total 7 Objects
key visualization for TS_104_3
TS_104_3

Run ID: RN-17822

5 - Excellent
  • Beta-amylase
    GT
  • Beta-galactosidase
    GT
  • cytosolic ribosome
    GT
  • Total 7 Objects
  • 1
  • 2
  • 3
  • 4
  • 5
  • 19