Deposition

Affinity-Captured Endo-/Lysosomes

Deposition ID:CZCDP-10318

Release Date: 2024-12-06

Last Modified: 2024-12-06

key visualization for Affinity-Captured Endo-/Lysosomes

Photo Caption: Central slab of 4 representative tomograms with selected sets of annotations.

Deposition Overview

Cryo-electron tomography data of affinity-captured LAMP1-GFP positive organelles from HEK293T cells. Contained data were collected on a Krios G4 using a Falcon 4i detector and SelctrisX energy filter. Tomograms were reconstructed using AreTomo3.

Authors

Deposition Data

Annotations:181

Publications

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Related Databases

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Methods Summary

Annotations	Method Type	Method Details	Method Links
181	Automated	Prediction using membrain-seg without rescaling and weights MemBrain_seg_v10_alpha.ckpt	Source Code:membrain-seg +1 more

Deposited Data

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Data Contents

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181 of 181 Annotations

Annotation Name	Object Shape Type	Method Type	Deposited In
100membrane Annotation ID: AN-33100	SegmentationMask	Automated	Dataset: Affinity-Captured Endo-/Lysosomes Run: 24may16a_Position_9_8
100membrane Annotation ID: AN-33099	SegmentationMask	Automated	Dataset: Affinity-Captured Endo-/Lysosomes Run: 24may16a_Position_9_7
100membrane Annotation ID: AN-33098	SegmentationMask	Automated	Dataset: Affinity-Captured Endo-/Lysosomes Run: 24may16a_Position_9_3
100membrane Annotation ID: AN-33097	SegmentationMask	Automated	Dataset: Affinity-Captured Endo-/Lysosomes Run: 24may16a_Position_9_2
100membrane Annotation ID: AN-33096	SegmentationMask	Automated	Dataset: Affinity-Captured Endo-/Lysosomes Run: 24may16a_Position_9_11
100membrane Annotation ID: AN-33095	SegmentationMask	Automated	Dataset: Affinity-Captured Endo-/Lysosomes Run: 24may16a_Position_9_10
100membrane Annotation ID: AN-33094	SegmentationMask	Automated	Dataset: Affinity-Captured Endo-/Lysosomes Run: 24may16a_Position_9
100membrane Annotation ID: AN-33093	SegmentationMask	Automated	Dataset: Affinity-Captured Endo-/Lysosomes Run: 24may16a_Position_8_9
100membrane Annotation ID: AN-33092	SegmentationMask	Automated	Dataset: Affinity-Captured Endo-/Lysosomes Run: 24may16a_Position_8_6
100membrane Annotation ID: AN-33091	SegmentationMask	Automated	Dataset: Affinity-Captured Endo-/Lysosomes Run: 24may16a_Position_8_2
100membrane Annotation ID: AN-33090	SegmentationMask	Automated	Dataset: Affinity-Captured Endo-/Lysosomes Run: 24may16a_Position_8_12
100membrane Annotation ID: AN-33089	SegmentationMask	Automated	Dataset: Affinity-Captured Endo-/Lysosomes Run: 24may16a_Position_8_11
100membrane Annotation ID: AN-33088	SegmentationMask	Automated	Dataset: Affinity-Captured Endo-/Lysosomes Run: 24may16a_Position_7_9
100membrane Annotation ID: AN-33087	SegmentationMask	Automated	Dataset: Affinity-Captured Endo-/Lysosomes Run: 24may16a_Position_7_8
100membrane Annotation ID: AN-33086	SegmentationMask	Automated	Dataset: Affinity-Captured Endo-/Lysosomes Run: 24may16a_Position_7_7
100membrane Annotation ID: AN-33085	SegmentationMask	Automated	Dataset: Affinity-Captured Endo-/Lysosomes Run: 24may16a_Position_7_6
100membrane Annotation ID: AN-33084	SegmentationMask	Automated	Dataset: Affinity-Captured Endo-/Lysosomes Run: 24may16a_Position_7_5
100membrane Annotation ID: AN-33083	SegmentationMask	Automated	Dataset: Affinity-Captured Endo-/Lysosomes Run: 24may16a_Position_7_4
100membrane Annotation ID: AN-33082	SegmentationMask	Automated	Dataset: Affinity-Captured Endo-/Lysosomes Run: 24may16a_Position_7_3
100membrane Annotation ID: AN-33081	SegmentationMask	Automated	Dataset: Affinity-Captured Endo-/Lysosomes Run: 24may16a_Position_7_2