Dataset
PP7 virus-like particles in E.Coli at 3.3 Å
- Dataset ID:DS-10455
Release Date: 2025-11-07
Last Modified: 2025-11-07
Photo Caption: Central slab from a representative tomogram of a Escherichia coli BL21(DE3) sample with selected set of annotations.
Dataset Overview
Leviridae PP7 VLP were incoluated into BL21(DE3) E.Coli and plunge-frozen at the 3-hour timepoint. The targets for cryoET were selected based on high crowdedness and variable thickness (100-300 nm). The processing pipeline includes AreTomo3 Live, Embrella, copick, octopi, and py2rely. The most abundant geometry- the icosahedral T=3- was refined to 3.3 Å.
Authors
Publications
Related Databases
EMDB ID:EMD-44783
Runs
314 of 314 Runs
Run Name | Tilt Series Quality Score | Objects | ||
|---|---|---|---|---|
 | 25aug25a_Position_1 Run ID: RN-18484 | 5 - Excellent |
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 | 25aug25a_Position_10 Run ID: RN-18485 | 5 - Excellent |
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 | 25aug25a_Position_100 Run ID: RN-18486 | 5 - Excellent |
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 | 25aug25a_Position_100_2 Run ID: RN-18487 | 5 - Excellent |
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 | 25aug25a_Position_101 Run ID: RN-18488 | 5 - Excellent |
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 | 25aug25a_Position_101_2 Run ID: RN-18489 | 5 - Excellent |
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 | 25aug25a_Position_102 Run ID: RN-18490 | 1 - Very Poor |
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 | 25aug25a_Position_102_2 Run ID: RN-18491 | 3 - Moderate |
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 | 25aug25a_Position_103 Run ID: RN-18492 | 1 - Very Poor |
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 | 25aug25a_Position_103_2 Run ID: RN-18493 | 5 - Excellent |
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 | 25aug25a_Position_103_3 Run ID: RN-18494 | 5 - Excellent |
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 | 25aug25a_Position_104 Run ID: RN-18495 | 5 - Excellent |
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 | 25aug25a_Position_104_2 Run ID: RN-18496 | 3 - Moderate |
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 | 25aug25a_Position_104_3 Run ID: RN-18497 | 1 - Very Poor |
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 | 25aug25a_Position_104_4 Run ID: RN-18498 | 3 - Moderate |
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 | 25aug25a_Position_104_5 Run ID: RN-18499 | 1 - Very Poor |
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 | 25aug25a_Position_105 Run ID: RN-18500 | 5 - Excellent |
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 | 25aug25a_Position_105_2 Run ID: RN-18501 | 4 - Good |
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 | 25aug25a_Position_106 Run ID: RN-18502 | 5 - Excellent |
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 | 25aug25a_Position_106_2 Run ID: RN-18503 | 5 - Excellent |
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